Giter Club home page Giter Club logo

outlooktest2009 / mhrwr Goto Github PK

View Code? Open in Web Editor NEW

This project forked from yangyq505/mhrwr

0.0 0.0 0.0 7 KB

Package: MHRWR Type: Package Title: MHRWR Prediction of lncRNA-disease associations based on multiple heterogeneous networks ================= Description: This package implements the MHRWR algorithm based on multiple heterogeneous networks, predicting lncRNA-disease associations. Files: 1.Dataset 1) LncFunGauSim.txt, DisSemGauSim.txt and GeneLls

Python 100.00%

mhrwr's Introduction

MHRWR

Package: MHRWR Type: Package Title: MHRWR Prediction of lncRNA-disease associations based on multiple heterogeneous networks

Description: This package implements the MHRWR algorithm based on multiple heterogeneous networks, predicting lncRNA-disease associations. Files:

1.Code

  1. pridiction.py:predict potential lncRNA-disease associations.
  2. Walker.py: The main function for the algorithm.
  3. CalW.py: the function of Calculating weight matrix.

2.Dataset

  1. LncFunGauSim.txt, DisSemGauSim.txt and GeneLlsGauSim.txt store lncRNA similarity matrix, disease similarity matrix, and gene similarity matrix, respectively;
  2. DisLncMat.txt, GeneDisMat.txt and GeneLncMat.txt stores known disease-lncRNA association information,known gene-disease association information and known gene-lncRNA association information,respectively;
  3. lncRNA_Name.txt, diseases_Name.txt and gene_name store lncRNA ids, disease ids,gene ids, respectively;
    Additionally, you can download Complete dataset from:https://pan.baidu.com/s/1VnYsys3jHs-KI3XoYa3n-Q

mhrwr's People

Contributors

yangyq505 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.