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covid19estimationhydroxychloroquine's Issues

Cohort FIle Names too long

The .sql filenames of the Cohort Definitions are tool long. This gives an error when doing a checkout with git. COVID_ID15_visitss_of_patients....

Had to go to root to check this repository out.

Error in TcosOfInterest.csv

It looks like the is an issue with TcosOfInterest.csv with excludedCovariateConceptIds separated by , insead of ;. This is leading to a parsing error when trying to read the file in the createTcos function.

object 'cohortMethodResult' not found

I have run this on IPCI . I receive this error: Error in unique(cohortMethodResult[, c("targetId", "comparatorId", "outcomeId")]) :
object 'cohortMethodResult' not found.

Not clear what the problem is.

Upload instructions question

The upload results instructions in the Readme are not clear to me. Do not think the function to submit at the end is correct.

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