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notmatthancock avatar notmatthancock commented on June 14, 2024

this example snippet might help:

import numpy as np
import pylidc

scan = pylidc.query(pylidc.Scan).first()
annotation_groups = scan.cluster_annotations()

for group in annotation_groups:
    print(np.mean([annotation.contour_slice_indices.mean() for annotation in group]))

# prints: 
# 25.375
# 46.5
# 47.5
# 67.625

You can also use the Annotation.centroid and Annotation.contours_matrix properties.

from pylidc.

longchingkwok331 avatar longchingkwok331 commented on June 14, 2024

thank you very much

from pylidc.

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