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perlslurm's Introduction

This script allows to run Jobs in Slurm with Perl

It also allows the following:

  • Run your sbatch-scripts from a Perl-Environment
  • Check for the parameters' sanity
  • Run nvidia-smi on all nodes you requested to see your GPU-usage and get it logged into an easy-to-read csv-file, almost automatically.
  • Get open ports on all requested nodes without effort
  • Load modules from Perl and use them in sub-sruns
  • Have a debug-system and log mostly everything easily

Also, did you know ...

... that you can use commands like

#SBATCH --signal=B:USR1@120

in non-bash-scripts like this perl-script? It works exactly the same way. Slurm does not care about the interpreter, it only reads the file as text-file and searches for /^#SBATCH (.*)/.

This way, 120 seconds before the slurm-time-limit ends, the process gets a USR1-signal and may respond to it appropriately (e.g. by shutting down a database properly instead of just killing it).

Just run...

sbatch --sbatch-options=here sbatch.pl --debug

(for example, you might add other options).

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