Comments (4)
This seems to be an issue with including "0" as a SampleID, but it needs more exploration.
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This has to do with the way meta data IDs are accessed (e.g. line 36 of utils.R). We need to move away from expecting IDs to run from 1:n
and use the ID directly.
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This dataset also had a bonus bug in the form of some non-standard characters. I also added a quick check of the metadata file to guess an appropriate encoding to use when reading it in. Seems to work fine so far.
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Issue 4 branch fixes this.
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Related Issues (14)
- Allow arbitrary number of clusters HOT 1
- Server disconnect
- Add data validation
- Use header HOT 1
- Check test data HOT 2
- Add random seed for reproducibility HOT 1
- Too many groups HOT 1
- Too many labels HOT 1
- Error on downloading pca loadings HOT 1
- Fix tabular output for composition HOT 1
- Composition and Marker heat map plots break with too many groups HOT 1
- Update testing to use shiny::runTests HOT 2
- Add kmeans clusters to downloaded output HOT 1
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