Comments (1)
Now implemented both in convert_orthologs
as an additional set of non121_non121_strategy
options, as well as in aggregate_mapped_genes
.
from orthogene.
Related Issues (20)
- Look into OMA
- Add phylogenetic tree databases
- Scale silhouettes HOT 2
- How to find all supported species? HOT 1
- How to use older annotations with convert_orthologs method? HOT 2
- Issue with create_background - found in EWCE HOT 4
- babelgene tests HOT 1
- Add earthworm orthologs HOT 1
- `Matrix.utils` deprecated HOT 1
- Dependency "Matrix.utils" is no longer available HOT 2
- `rphylopic` failing HOT 3
- Replace `ggtree`/`ggimage` HOT 1
- Figure out why "Canis lupus familiaris" 1:1 orthologs are reduced HOT 3
- GHA: `Package suggested but not available: ‘rworkflows’` HOT 1
- GHA: Docker: Error: both username and password must be set to login both username and password must be set to login HOT 2
- Consider adding ortholog mappings from Zoonomia
- convert_orthologs() output is list, with "Warning: Coercing LHS to a list" HOT 5
- Consider integrating `taxize`
- Determine which journal to publish in
- The result was 0 on R package orthogene HOT 6
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from orthogene.