lucid3's Introduction

lucid3: Loop and uCrystals identification version 3

Authors: Olof Svensson and Sogeti

lucid3 is a computer vision Python library that detects crystallography samples holders.

mxCuBE relies lucid3 to provide automatic centring.

Dependencies:

python >= 3.5
opencv >= 2.4

Development

Install from source

python -m pip install -e .[dev]

Run tests

pytest

Launch lucid3 from the command line

lucid3 -h
usage: lucid3 [-h] [--vertical] [--display] [--create_result_file] [--result_directory RESULT_DIRECTORY] [--debug] snapshot_file_path

Application for finding loop in diffractometer snapshot of sample

required arguments:
  snapshot_file_path    Path to snapshot jpg/png file

optional arguments:
  --vertical            Vertical rotation axis
  --display             Display snapshot with result
  --create_result_file  Create an image file with result
  --result_directory RESULT_DIRECTORY
                        Directory to where store result file (default cwd)
  --debug               Display snapshot with all intermediate steps and with result

lucid3's People

Contributors

Watchers

lucid3's Issues

Tag the repo

Hello,
I could publish a conda package on conda-forge of this repo. That would make mxcube installation easier.
I only need the repo to be tagged after each new version.
Would that be possible?

It would also be nice to have the python package published on pypi.org. That would ensure no-one else takes the lucid3 name.

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