Giter Club home page Giter Club logo

143719's Introduction

NEURON and Mathematica files from the paper:

On the mechanisms underlying the depolarization block in the spiking
dynamics of CA1 pyramidal neurons by D.Bianchi, A. Marasco,
A.Limongiello, C.Marchetti, H.Marie,B.Tirozzi, M.Migliore (2012).
J Comput Neurosci.

The CA1 morphological neuron model has been implemented starting by
merging model files from Poirazi et al. (ModelDB accession number
20212), and from Shah et al. (ModelDB accession number 112546),
adapting a few parameters from their original values to take into
account the specific set of experimental traces used in this work, as
discussed in the Appendix of the paper.

The Simulation.hoc file in the "experiment" directory will reproduce
the results in Fig. 5 of the paper.

The Mathematica file refers to the bifurcation analysis of the
specific somatic model used in the paper.
The file will be visualized correctly with Mathematica, so save it on
your pc and then open with the software.

To run the simulation which will reproduce the results in Fig. 9, type
SHIFT + ENTER in the current Mathematica session.

Questions on the NEURON simulation should be addressed to
(replace -at- with the usual @ symbol):
danielabianchi12-at-gmail.com
daniela.bianchi-at-roma1.infn.it

Questions on the Mathematica file should be addressed to
(replace -at- with the usual @ symbol):
alessandro.limongiello-at-unina.it

143719's People

Watchers

 avatar  avatar  avatar  avatar

Forkers

opensourcebrain

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.