Name: Michael Kaufman
Type: User
Company: University of Colorado Anschutz Medical Campus
Bio: Informatics Fellow for the RNA Bioscience Initiative at the University of Colorado Anschutz Medical Campus
• PhD in Cell, Stem Cell, and Developmental Biology
Location: Aurora, Colorado
Michael Kaufman's Projects
Cookiecutter template for Snakemake pipelines
Spatial Transcriptomics Algorithm Reconstructing Copy-number Heterogeneity
streamlit-nginx is a Docker image with Streamlit and Nginx for web-based demo applications in Python 3.6 and above, in a single container.
Technology agnostic long read analysis pipeline for transcriptomes
scripts to annotate transcription factor binding site analysis from: http://cisbp.ccbr.utoronto.ca/TFTools.php and http://jaspar.genereg.net/