A tool to build and customize Papaya. The latest build of Papaya-Builder is located in the Papaya project at libs/papaya-builder.jar.

Run the Ant script, build.xml, found in the root of the project. This will output papaya-builder.jar to the build folder. Copy papaya-builder.jar to the lib folder in the Papaya project.

usage: papaya-builder [options]
 -atlas <file>           add atlas (default atlas if no arg)
 -footnote <text>        add a footnote
 -help                   print this message
 -images <files>         images to include
 -surfaces <files>       surfaces to include
 -local                  build for local usage
 -nodicom                do not include DICOM support
 -nojquery               do not include JQuery library
 -parameterfile <file>   specify parameters
 -root <dir>             papaya project directory
 -sample                 include sample image
 -singlefile             output a single HTML file
 -title <text>           add a title

Atlas must follow the FSL Atlas Specification. When building, provide the path to the atlas XML file. To use the default Talairach/MNI label atlas, leave the <file> field blank.

Prints the above list of parameters.

Specify one or more image file paths. These images will appear as File menu options (similar to the sample image).

Specify one or more surface file paths. These surfaces will appear as File menu options.

To build for local usage, include the -local flag. In this case, image data is encoded and embedded within the JavaScript.

Do not include the DICOM (Daikon) library.

Do not include the Jquery library. If your webpage already loads Jquery, you can avoid adding it again to papaya.js. The output index.html will reference the ajax.googleapis.com hosted Jquery as a placeholder.

A file that contains the Papaya config parameters. The contents of this file will be concatenated to "var params = " in the JavaScript portion of the output HTML header. See http://rii.uthscsa.edu/mango/papaya_devguide.html for parameter usage.

Point the builder to the root of the papaya folder. Omiting this option will use the current working directory.

Use this option to include a sample image. An Add Sample Image option will appear in the Papaya viewer File menu.

Outputs a single HTML file: collapses all HTML, CSS, JavaScript, and image data (if local) into one file.

Adds a title to the viewer.

Add a caption below the viewer.

Papaya-Builder makes use of the following third-party libraries:

• Apache Commons CLI
• Apache Commons Codec
• Apache Commons IO
• JSON in Java
• YUICompressor