Giter Club home page Giter Club logo

comparing-ppi-networks-of-sars-cov-2-and-h1n1-influenza's Introduction

Comparing-PPI-networks-of-SARS-CoV-2-and-H1N1-influenza

This code is related to our recently proposed method for:

  • Studying SARS-CoV-2 and (H1N1) influenza PPINs to investigate similarities and differences between them.
  • Examining complex network properties such as graph density, degree distribution, and 21 different centrality measures.
  • Fitting power law and exponential distributions.
  • Dimensionality reduction and Applying unsupervised learning methods to reveal appropriate centrality measures.

Requirement:

This program is suitable for R Version 1.1.453 and above versions.

The details of the used dataset can be accessible in the below papers:

Khorsand B, Savadi, A., & Naghibzadeh, M. (2020). SARS-CoV-2-human protein-protein interaction network. Informatics in medicine unlocked 2020, 20(100413).

Khorsand B, Savadi, A., Zahiri, J., & Naghibzadeh, M. : Alpha influenza virus infiltration prediction using virus-human protein–protein interaction network. . Math Biosci Eng 2020, 17(4)(3109-29.).

Feedback:

Please do not hesitate to contact us if there is anything we may be able to help you with: Hakimeh Khojasteh, [email protected]

comparing-ppi-networks-of-sars-cov-2-and-h1n1-influenza's People

Contributors

khojasteh-hb avatar

Stargazers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.