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afca's Introduction

Aging Fly Cell Atlas (AFCA)



Updates

  • (12.07.2022) Release of AFCA v1.0



Reference

Lu T-C, Brbić M, Park Y-J, Jackson T, Chen J, Kolluru SS, Qi Y, Katheder NS, Cai XT, Lee S, Chen Y-C, Auld N, Welsch D, D’Souza S, Pisco AO, Jones RC, Leskovec J, Lai EC, Bellen HJ, Luo L, Jasper H, Quake SR, Li H. 2022. Aging Fly Cell Atlas Identifies Exhaustive Aging Features at Cellular Resolution. doi:10.1101/2022.12.06.519355



Data Portal

FlyAgingAtlas



Data availability

h5ad files with cellBC & cell-type annotations

head
body
head and body

Raw data on the NCBI GEO

GEO#: GSE218661

afca's People

Contributors

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Watchers

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Forkers

richardwsong

afca's Issues

Question about data

The dataset I downloaded are n_obs × n_vars = 566,254 × 15,992, which is different to the paper reported that dataset contain >868,000 nuclei.
In addition, the dimensions of data in the Figure1.ipynb script are n_obs × n_vars = 868,209 × 16,444.
Could you please give me explanation for this difference? Thank you in advance.

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