mattingsdal Goto Github PK
Name: Morten Mattingsdal
Type: User
Company: University of Agder
Bio: Postdoc in marine genomics. Uses github to dump usefull scripts and workflows.
Location: Norway
Morten Mattingsdal's Projects
amplicon-analysis
bayescan
Conversion script: vcf to a input file used in bayescan
bio_tools
Useful bioinformatic scripts
bmp
BMP scripts
compara
corkwing.1
Documentaiton of scripts used in paper 1
corkwing_1
corkwing_paper_1
demographicinference
Scripts to compare models of divergence using diffusion approximation (dadi)
enveomics
Scripts and reference libraries at Kostas lab.
fastautils
functional-annotation
Functional Annotation
genome-annotation
Annotation using MAKER
genome-assembly
SNPs and Indel detection
human-admixture
ixodes-rnaseq-
minion_detector
popgen-stats
Scripts to calculate population genetics statistics
population-genomics
Population genomics
reformat
Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format
structure_threader
A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".
taxonomic-blast
vcf2bayescan
It turns a VCF file into the input format for BayeScan; provided a tab-delimited population assignment file
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