matt-sd-watson / augur Goto Github PK

I am a programmer/developer with the LTRI at Mount Sinai (Toronto, Canada) working jointly with the Campbell and Jackson groups with experience in:

🐍 programming and software development
📌 Data science/analysis
♋ cancer genomics
🐛 public health pathogen analysis
💻 single cell multi-omics

🔬 By day: dev, pipeline engineering, coding, statistics, CI/CD
🎓 By night: pursuing an online MSc. in Data Science, University of Texas at Austin
⏰ Off the clock: I can be found in a 🛶 or seeking a new international adventure ✈️. Almost always looking for a good 🍺.

Check out some of my software packages!

🏎️ FASTAfurious
🍄 spora
🔀 nf-processes
📊 cytomarker

Also check out some of the public Github software that I have contributed to!

🦔 pangolin
🌲 ggtree
🔎 civet/civet3
⚡ snipit
📶 infercnv