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ANIwBBH

Aix Marseille university - Genomic Comparative course - ANI with BBH tool

Introduction

This tool has been developed to compute ANI from hit tables obtained with Blastn for Mycoplasma genitalium G37, Mycoplasma genitalium M2321, Mycoplasma genitalium M6320, Mycoplasma girerdii UC B3 and Mycoplasma sp. NEAQ87857. The program perform BBH for the 5 genomes and return the ANI for each parwise genomes-

Requirements

python 3.9
csv library

Quick help

To run the program only specify your own path for hit and feature tables.

Info

Note that the program only have been created for a specific goal in the aim of Comparative Genomic course and may not be adapted for other issues.

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