Comments (2)
From [email protected] on August 23, 2012 00:33:16
Please edit the file $HOME/programs/execute/cutadapt and replace the line "sys.exc_clear()" with "pass". That command isn't available in Python 3 and the fix isn't included in cutadapt 1.1.
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From [email protected] on October 12, 2012 04:16:40
Status: Fixed
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Related Issues (20)
- Cutadapt 4.7 hangs when using process substitution HOT 10
- Crash on sending interleaved output to stdout
- cutadapt cannot read from stdin with xopen 2.0.0 HOT 3
- Feature request: Support for multiple FastQ pairs
- Ensuring to find the correct file after Demultiplexing my 16S amplicon raw dataset with combinatorial dual indexes cutadapt command HOT 5
- Pipe multiple adatper trimming steps is unsupported when using the python API. HOT 5
- Error: BiocParallel errors HOT 5
- Remove the "Incomplete adapter sequence" warning
- Nanopore adapter detection HOT 1
- "OverflowError: FASTA/FASTQ record does not fit into buffer" when trimming ONT reads HOT 7
- Unexpected trimming behavior HOT 5
- cutadapt: error: cutadapt not able to trim the desired adapto HOT 3
- Error in FASTQ file at line 20136: Length of sequence and qualities differ HOT 2
- Adapter matches in the middle of a read masked with N HOT 2
- Feature request: shorten paired-end reads with separate values for --length HOT 1
- Help to get accurate counts of demultiplexed amplicons using cutadapt HOT 2
- Adapters in form of file and linked mode HOT 4
- Problems reading stdin on Windows 11 Python 3.12 HOT 4
- Heterogeneity Spacers and Primers
- Using --revcomb on paired-end data
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