Comments (3)
marcelm
commented on July 24, 2024
From [email protected] on April 17, 2012 00:52:44
How exactly do the adapters appear in the read? Let’s say the adapter has ten bases. Is it possible that a read contains only the last few bases of the adapter? The -g parameter allows this, but I’m still not sure whether this is the correct behavior, even for base-space data. Or will it be the case that the always (or almost always) starts with a full adapter sequence?
Could you send me a few reads that contain 5' adapters and also tell me the adapter sequence in base space?
Labels: -Type-Defect Type-Enhancement
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marcelm
commented on July 24, 2024
From [email protected] on May 12, 2012 15:17:29
I'll close this issue for now as I don't know how to implement the requested feature. Please comment if you have more information.
Status: Invalid
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marcelm
commented on July 24, 2024
From [email protected] on June 17, 2012 10:31:20
This has been implemented in the soon to be released cutadapt 1.1.
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