This repo contains the validation scripts for the Federated Cox Regression Algorithm https://github.com/IKNL/vtg.coxph. Works with Vantage v2.3.4
- Input -- Beta Values Obtained from Training the Cox Regression Algorithm.
- Output -- Concordance Index
1. Clone the repository to your local machine
2. cd vtg.coxph_val/
3. The repo contains a [Dockerfile](https://github.com/MaastrichtU-CDS/vtg.coxph_val/blob/main/Dockerfile) which can be used to build the docker image. Follow the commands below
- docker build -t <docker_image_name> .
- docker tag <docker_image_name> <docker_repository_name/docker_image_name>
- docker push <docker_repository_name/docker_image_name>
The code supplied in the repository comes with a data filtering script that is custom-built for the project Atomcat2. If you want to adapt it for your project, make changes to the file here
An example Jupyter Notebook can be found here