Name: Sibbe Bakker
Type: User
Company: Wageningen University and Research (WUR)
Bio: I am a bioinformatics master student with a keen interest in bio technology and programming. This is my private repo, please see my gitlab page for uni work.
Location: Elst
Blog: https://luke-ebbis.github.io/
Sibbe Bakker's Projects
Transportation planning and traffic simulation software for creating cities friendlier to walking, biking, and public transit
This repository is a list of machine learning libraries written in Rust. It's a compilation of GitHub repositories, blogs, books, movies, discussions, papers, etc. 🦀
Conversion of PDBx/mmCIF files to best effort/minimal PDB files
A massively parallel, high-level programming language
Fork of a repo by Vedh Ramalingam Kannan
Play snake in the terminal
A github repo for me to practice my coding work
With pixi to manage dependencies
Benchmarking the combfold pipeline
Complex prediction using combfold
Contact map analysis for biomolecules; based on MDTraj
Bioinformatics containers
A tool to create visual HTML reports from collections of CSV/TSV tables
Interactive ASCII art diagram generators. :star2:
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Calculating distance maps between subunits of PDB or mCIF files
DockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol
Ultra-fast in-silico structure mutation
DNA foundation modeling from molecular to genome scale
Fisher exact test implemented in lisp
Fast Linear Interacting Peptides Predictor
Python library to handle Gene Ontology (GO) terms
O(1) Algorithm to check if number is prime that works in 95%+ cases.
Config files for my GitHub profile.
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes