This project forked from gerberlab/mctimme2
License: GNU General Public License v3.0
This repository contains code for the MC-TIMME2 (Microbial Counts Trajectories Infinite Mixture Model Engine) algorithm.
The code can be installed using pip (Python 3). Installation within a conda environment is recommended.
pip install -e .
After installation, the code can be run using the command
MCTIMME2_model config.file
where config.file is the path the configuration file.
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