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covid19's Introduction

Analyzing COVID19 (Novel Coronavirus-2) data

Viewing data graphically to understand the impact of the Novel Coronavirus country-wise over time and get the big picture with information involving the number of new confirmed cases, deaths and the % increase in the value.

Background

Coronavirus disease 2019 (COVID-19) is an infectious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).
The disease was first identified in 2019 in Wuhan, the capital of Hubei, China, and has since spread globally, resulting in the 2019โ€“20 coronavirus pandemic. As the COVID-19 has huge potential implications, this project gives a preliminary platform to dive into the available data and gain insights.


Data

Source

John Hopkins University CSSE Novel Coronavirus (COVID-19) Cases data: https://github.com/CSSEGISandData/COVID-19

Bias: Selection bias on confirmed over those tested, as there are discriminatory forces that determine who gets tested - age, availability, price/demographic, and so on. These factors can change with time. Further, multiple countries are investing heavily to make the tests more available them, which also affects the report.

Tracking

Covid Tracking Projects: https://covidtracking.com

Keywords

#COVID19
#covid19
#coronavirus
#CoronaVirus
#coronavirustexas
#Coronavirustexas
#coronavirusnewyork
#coronaviruscalifornia

More sources: https://www.linkedin.com/pulse/covid-19-data-sources-rajarshi-chattopadhyay/


Requirements

  • PySimpleGUI: for GUI
  • geopy: to run the distance widget (from the PSG-Widgets repository)
pip3 install -r requirements.txt
  • PySimpleGUI-exemaker: (Optional) to make executable GUI using pyinstaller.Reference

Run

python3 app.py

If prompted, select settings and locations


Configuration and Graphs

  • graphs: Each graph displays a header that shows the country name, the number of new cases/deaths in the last data point and the % increase this value represents.
    • bar plot of number cases
    • day-wise, max upto 63 previous days
    • country/region wise

graphs

  • settings
    • confirmed cases or deaths
    • autoscaled or absolute value
    • number of days to display

settings

  • locations
    • country list
    • NOTE: no, of countries must be equal to no. of graphs

locations

Saved in app.cfg


Sample Report based on preliminary analysis

coronavirus_timeseries.R

03-25-2020

China: Cumulative cases by provinces over time, starting 10-Feb-2020

The curve appears to be flattening, which is good.

China: New cases by provinces over time, starting 10-Feb-2020

Very few or no new cases, which is good.

Hubei, China: New cases over time, starting 10-Feb-2020

Three major spikes followed by a consistent drop, which is good.

USA: Cumulative cases over time, starting 10-Mar-2020

The curve exponentially increasing, which is concerning.

USA: New cases over time, starting 10-Mar-2020

The curve increasing, but slower which is still concerning, with a glimmer of hope.


More information

WHO

Download daily PDF files that have the "Situation Report" for the most up to date information.


Credits

PySimpleGUI.com

GUI tool based on the PySimpleGUI-COVID19 project.

Modifications and enhancements have been made to cater to the requirements of my project goals.

covid19's People

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