Comments (2)
laninsky
commented on July 27, 2024
Hi Omid,
In the detailed workflow we mention that the LD step is used to "chuck out one out of a pair of loci in LD across P populations" (i.e. one of them is retained). Do you think this wording is clear enough? Happy to update it if you think putting it another way would help.
Cheers,
Alana
from gbs_snp_filter.
OmidJa
commented on July 27, 2024
Hi Alana,
Sorry I didn't pay attention to that sentence. It is completely clear to be understood.
Thank you very much.
Cheers,
Omid
from gbs_snp_filter.
Related Issues (11)
- Error in -removepops HOT 14
- unknown issue HOT 6
- Error in generating .HWE.vcf file HOT 4
- Failing after PLINK for stickleback test data HOT 1
- Add some guidance on what vcf to use
- Error in generating the .ld.vcf file (the final step) HOT 4
- Check the formatting of the vcf
- Address some deprecating in code HOT 1
- locus ID regex pattern when column has colons HOT 5
- Error using HWE.R HOT 5
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from gbs_snp_filter.