kumes / aggraphsearch Goto Github PK

I learn the usage of R packages "agGraphSearch" with tutorial "A workflow to use agGraphSearch and Wikidata with PolyInfo terms".
In Chapter 9, this code needs the dataset "高分子辞典OCR_2column_jpn_RRR.csv".
Well, if possible, share the dataset above please.
Thank you.

In this time, I try to learn a usage of the package in the tutorial ([Wikidata] agGraphSearch tutorial: A workflow to use agGraphSearch and Wikidata with PolyInfo terms).
But I can't get datasets from Google Drive where you own.
Then, if you allow me for using datasets above, please put them in the drive.

Thank you for your kind.

At installing 'agGraphSearch', 'Error: object 'quartz' is not exported by 'namespace:grDevices'' occured.
I think 'quartz' is package only for macOS. But I would like install it in Windows 10(64bit) environment.

Let me know how to resolve the issue.

Thank you for your kind.

@kumeS san, I resume a tutorial titled above.
In section 3.5.2 'Individual network diagrams', the programme shows a message below.

Warning message in dir.create(outputDir):
"cannot create dir 'agVisNetwork_急性リンパ性白血病.wd:Q180664_221209_files', reason 'Invalid argument'"
Warning message in dir.create(target_dir):
"cannot create dir 'agVisNetwork_急性リンパ性白血病.wd:Q180664_221209_files\htmlwidgets-1.5.4', reason 'Invalid argument'"
Error in normalizePath(path.expand(path), winslash, mustWork): path[1]="agVisNetwork_急性リンパ性白血病.wd:Q180664_221209_files/htmlwidgets-1.5.4": ファイル名、ディレクトリ名、またはボリューム ラベルの構文が間違っています。
Traceback:

1. agVisNetwork(Graph = res5[[n]], Selected = Lab00, Browse = FALSE,
   . Output = TRUE, FilePath = FileName)
2. VIS %>% networkD3::saveNetwork(file = FilePath)
3. networkD3::saveNetwork(., file = FilePath)
4. htmlwidgets::saveWidget(network, file, selfcontained)
5. pandoc_save_markdown(html, file = file, libdir = libdir, background = background,
   . title = title)
6. lapply(rendered$dependencies, function(dep) {
   . dep <- htmltools::copyDependencyToDir(dep, libdir, FALSE)
   . dep <- htmltools::makeDependencyRelative(dep, dir, FALSE)
   . dep
   . })
7. FUN(X[[i]], ...)
8. htmltools::copyDependencyToDir(dep, libdir, FALSE)
9. normalizePath(target_dir, "/", TRUE)

Well, I think that in Windows OS, ":" could not be used in directory or folder or file name.
(so that, in macOS, the programme is done. But another [WARNING] messages appear. That is "Deprecated: --self-contained. use --embed-resources --standalone".)

Then, could you please fix the probelms.

Thank you for your kindness.