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jeffbezansoncomplexvid.jl's Issues
Isolate logic
I might be reading it wrong but I believe
symptomsN = @acset_colim yG begin
e::E; i::Im
im(i) == src(e); symptomsIm(i)==0; layer(e)==:Home
end
Rule(homomorphism(symptomsI, symptomsL; monic=true), id(symptomsI);
ac=[AppCond(homomorphism(symptomsL, symptomsN), false)])
means the connection will be removed if !(symptomatic && home)
, when it should be symptomatic && !home
?
failure in recovery box
I get
ERROR: Fail
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] update!(#unused#::Base.RefValue{Any}, boxdata::Fail, #unused#::StructTightACSetTransformation{TypeLevelBasicSchema{Symbol, Tuple{:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D}, Tuple{(:src, :E, :V), (:tgt, :E, :V), (:inv, :E, :E), (:s, :S, :V), (:ia, :Ia, :V), (:im, :Im, :V), (:is, :Is, :V), (:ic, :Ic, :V), (:r, :R, :V), (:d, :D, :V)}, Tuple{:Name, :Num}, Tuple{(:layer, :E, :Name), (:age, :V, :Num), (:daysIa, :Ia, :Num), (:daysIm, :Im, :Num), (:daysIc, :Ic, :Num), (:daysIs, :Is, :Num), (:symptomsIa, :Ia, :Num), (:symptomsIm, :Im, :Num), (:symptomsIc, :Ic, :Num), (:symptomsIs, :Is, :Num)}}, NamedTuple{(:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D, :Name, :Num), Tuple{Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, Catlab.CategoricalAlgebra.FinSets.FinDomFunctionVector{Int64, Vector{Int64}, Catlab.CategoricalAlgebra.FinSets.FinSetInt}, VarFunction{Symbol}, VarFunction{Int64}}}, AnonACSet{TypeLevelBasicSchema{Symbol, Tuple{:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D}, Tuple{(:src, :E, :V), (:tgt, :E, :V), (:inv, :E, :E), (:s, :S, :V), (:ia, :Ia, :V), (:im, :Im, :V), (:is, :Is, :V), (:ic, :Ic, :V), (:r, :R, :V), (:d, :D, :V)}, Tuple{:Name, :Num}, Tuple{(:layer, :E, :Name), (:age, :V, :Num), (:daysIa, :Ia, :Num), (:daysIm, :Im, :Num), (:daysIc, :Ic, :Num), (:daysIs, :Is, :Num), (:symptomsIa, :Ia, :Num), (:symptomsIm, :Im, :Num), (:symptomsIc, :Ic, :Num), (:symptomsIs, :Is, :Num)}}, Tuple{Symbol, Int64}, NamedTuple{(:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D, :Name, :Num), NTuple{11, BitSetParts}}, NamedTuple{(:src, :tgt, :inv, :s, :ia, :im, :is, :ic, :r, :d, :layer, :age, :daysIa, :daysIm, :daysIc, :daysIs, :symptomsIa, :symptomsIm, :symptomsIc, :symptomsIs), Tuple{ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseColumn{Union{AttrVar, Symbol}, Vector{Union{AttrVar, Symbol}}}, Vararg{ACSets.ColumnImplementations.DenseColumn{Union{AttrVar, Int64}, Vector{Union{AttrVar, Int64}}}, 9}}}, MarkAsDeleted}, AnonACSet{TypeLevelBasicSchema{Symbol, Tuple{:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D}, Tuple{(:src, :E, :V), (:tgt, :E, :V), (:inv, :E, :E), (:s, :S, :V), (:ia, :Ia, :V), (:im, :Im, :V), (:is, :Is, :V), (:ic, :Ic, :V), (:r, :R, :V), (:d, :D, :V)}, Tuple{:Name, :Num}, Tuple{(:layer, :E, :Name), (:age, :V, :Num), (:daysIa, :Ia, :Num), (:daysIm, :Im, :Num), (:daysIc, :Ic, :Num), (:daysIs, :Is, :Num), (:symptomsIa, :Ia, :Num), (:symptomsIm, :Im, :Num), (:symptomsIc, :Ic, :Num), (:symptomsIs, :Is, :Num)}}, Tuple{Symbol, Int64}, NamedTuple{(:V, :E, :S, :Ia, :Im, :Is, :Ic, :R, :D, :Name, :Num), NTuple{11, BitSetParts}}, NamedTuple{(:src, :tgt, :inv, :s, :ia, :im, :is, :ic, :r, :d, :layer, :age, :daysIa, :daysIm, :daysIc, :daysIs, :symptomsIa, :symptomsIm, :symptomsIc, :symptomsIs), Tuple{ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseFinColumn{Vector{Int64}}, ACSets.ColumnImplementations.DenseColumn{Union{AttrVar, Symbol}, Vector{Union{AttrVar, Symbol}}}, Vararg{ACSets.ColumnImplementations.DenseColumn{Union{AttrVar, Int64}, Vector{Union{AttrVar, Int64}}}, 9}}}, MarkAsDeleted}}, inport::Int64)
Debug output reveals this is due to failure in the recover
box.
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