Puncta Analyzer v2.0 is an ImageJ 2.0 plugin for detecting and quantifying punctate co-localization in multi-channel images.
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Install JDK
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Install maven
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Fork the puncta analyzer repo (or download project zip)
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Execute 'mvn compile' in project directory (where the pom.xml is located)
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Create a 'PunctaAnalyzer' directory in the your ImageJ plugins directory
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Copy all of the class files (bytecode) in target/classes to plugins/PunctaAnalyzer
Project Home: Puncta Analyzer
Operational Instructions: Documentation
Continuous integration: [travis-ci.org] (http://travis-ci.org/#!/physion/puncta-analyzer)
Underlying technology: ImageJ
Previous version: Puncta Analyzer v1.1