Name: Kelly Sovacool, PhD
Type: User
Company: @CCBR
Bio: Bioinformatics Software Engineer
Location: Remote from Ann Arbor, MI, USA
Blog: sovacool.dev
Hi, I'm Kelly! I'm a bioinformatician developing and maintaining open source software with the Frederick National Laboratory for Cancer Research on the CCBR core team. You can learn more about me at my personal website.
mim-trnaseq
Modification-induced misincorporation tRNA sequencing
mirna-diff-expr
Differential expression analysis for miRNA sequence data
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
mothur
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
mothur-sensspec-debug
mothur.github.io
wiki for the mothur software package
phd-defense
Presentation for my PhD defense seminar
phd-diss
My Bioinformatics PhD dissertation
pkg-downloads
A report of mikropml package download counts from cranlogs
planets-kelly
Teaching git at Software Carpentry Workshop 2019-07-01
practice-repo
example repo for teaching git & github
prelim
My abstract, proposal, and presentation for the preliminary exam for the UMich Bioinformatics PhD program.
quarto-manuscript
Quarto template for manuscripts & preprints
quarto-site-example
An example quarto website for curricula
r-mikropml-feedstock
A conda-smithy repository for r-mikropml.
rackham
Quarto template for U-M Rackham Dissertations
rcpp.practice
Practice using Rcpp
recipes-kelly
Teaching git at WISE Software Carpentry Workshop 2020-01-07
sandbox
a sandbox for testing & exploration
schloss_cluster_peerj_2015
Replication study of He et al. (2015) in Microbiome by Pat Schloss & Sarah Westcott
schlosslab.github.io
The website for the Schloss Lab at the University of Michigan
snakemake-rscript-log-mwe
A minimal working example of using Snakemake log files with R scripts
snakemake_hpc_mwe
A minimal working example of using Snakemake on an HPC running PBS-torque or SLURM.
sovacool.art
Kate Sovacool's personal website
sovatools
Sovacool's Tools: miscellanea with no other obvious home
stats-ref
A reference for concepts & equations in statistics.
test-mkdocs
reprex for mkdocs bug in bold styling
test-opti-random
thesis-umich
LaTeX template for University of Michigan Thesis
tidytest
Practice from Building Tidy Tools workshop at rstudio::conf(2020)
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
