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30_days_of_code_challange

assignment-5-protein-alignments

assignment2

barcode_reader

biol_343

Assignments from biology 343, data analysis for biology

bpnet

Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them

cisc_121

deep-protein-generation

dragontree

fastbook

The fastai book, published as Jupyter Notebooks

first-contributions

🚀✨ Help beginners to contribute to open source projects

genome_quebec_interactive_sanger_analysis

gomcl

GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions

obo_parser

Parses ontologies in .obo format (such as the Human Phenotype Ontology) and converts them to a .tsv table.

proteingan

rentrez

Assignment 3

seqdesign

Protein design and variant prediction using autoregressive generative models

seqdesign-pytorch

Protein design and variant prediction using autoregressive generative models

targeted_literature_reviews_via_webscraping

Web scraping to get articles for a given query. It returns an spreadsheet with titles, abstracts, doi and references of the article

tickai

watershed

Prioritization of functional rare genetic variants by integrating genomic annotations and RNA-seq