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adgc_hrc_merge's Introduction

ADGC HRC Imputed Data Merge

To Use:

  1. Download Repo
  2. Download conda/miniconda, and install snakemake.
  3. Install all program dependencies and ensure they are on the PATH.
  4. Run a dry run with something like (remove -np for real run):
snakemake -np --verbose -j 999 --cluster-config ../scripts/cluster.json -s ../scripts/Snakefile --cluster \
"sbatch \
--ntasks {cluster.ntasks} \
--time {cluster.time} \
--mem {cluster.mem} \
--job-name {cluster.name} \
--mail-type {cluster.mail-type} \
--mail-user {cluster.mail-user} \
--parsable" \
--cluster-status ../scripts/slurm_status.py

adgc_hrc_merge's People

Contributors

kboehme avatar

Watchers

James Cloos avatar Brian Fulton-Howard avatar avatar

Forkers

smukherj09

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