Katharina Hoff's Projects
Lecture materials for the course "Bioinformatisches Praktikum" at University of Greifswald
Simple snakemake workflows for handling BRAKER on large data sets
This repository contains course materials for a workshop on structural genome annotation with BRAKER and TSEBRA
A genome completeness evaluation tool based on miniprot
This is the standalone version of the EviAnn pipeline
Repository that describes and contains data used for the manuscript on GALBA
GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV
Statistics & R Materials
Documentation and software for analysis of lipoproteins in Klebsiella pneumoniae
An accurate GFF3/GTF lift over pipeline
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
Mathematica code for PhyloNetReductions
An introductory Python course for people with programming experience
Python compact course (preparatory for more advanced courses)
Parser for Reconstruct XML files of electron microscopy images with marked contours
Statistics with Python
Bilder zu den JupyterNotebooks von Statistik I
This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.