jwicquart / monitoring_workflow Goto Github PK

I'm a marine ecologist working on temporal trends, disturbance, and resilience of coral reefs. Most of my research projects are related to the Global Coral Reef Monitoring Network (GCRMN), which is a global network of people involved in coral reef monitoring, that aims to provide the best information available about coral reef status and trends.

• 🏦 Location: Nantes and Perpignan (France)
• 📚 Research topics: macroecology temporal ecology resilience data integration monitoring
• 🗺️ Ecosystem: coral reefs
• 💻 Tools: R Google Earth Engine LaTeX
• 📦 Favorite R packages: tidyverse tidymodels sf patchwork

Repositories associated with the GCRMN

• 💹 GCRMN synthetic datasets
  • gcrmndb_fish. Code repository for the GCRMN fish abundance and biomass synthetic dataset
  • gcrmndb_benthos. Code repository for the GCRMN benthic synthetic dataset
• 📘 GCRMN reports
  • pacific_2023. Code repository for the Status and Trends of Pacific Coral Reefs - 2023
• 🏷️ Others
  • gcrmn_regions. Code repository to create the shapefile of GCRMN regions

Repositories associated with scientific articles

• 📄 monitoring_workflow. Code repository for the article:
  • A workflow to integrate ecological monitoring data from different sources
• 📄 fish_growth. Code repository for the article:
  • Individual back-calculated size-at-age based on otoliths from Pacific coral reef fish species