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View Code? Open in Web Editor NEWCommunity detection engine for the degree-corrected Stochastic Block Model, using the Belief Propagation algorithm.
License: GNU General Public License v3.0
sbm-bp's Issues
Make failed due to multiple errors
I downloaded the boost library and put it under the root folder of this project. However, when I run make, I am getting multiple errors:
make
make[1]: Entering directory '/home/jovyan/sbm-bp'
make[2]: Entering directory '/home/jovyan/sbm-bp'
make[2]: Leaving directory '/home/jovyan/sbm-bp'
make[2]: Entering directory '/home/jovyan/sbm-bp'
[ 16%] Building CXX object src/CMakeFiles/bp.dir/main.cpp.o
In file included from /home/jovyan/sbm-bp/boost/bind/mem_fn.hpp:25:0,
from /home/jovyan/sbm-bp/boost/mem_fn.hpp:22,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/get_pointer.hpp:25:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/jovyan/sbm-bp/boost/function/function_base.hpp:16,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:17,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/jovyan/sbm-bp/boost/smart_ptr/shared_ptr.hpp:32:0,
from /home/jovyan/sbm-bp/boost/shared_ptr.hpp:17,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:16,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/smart_ptr/detail/shared_count.hpp:196:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/jovyan/sbm-bp/boost/function/function_base.hpp:16,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:17,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/jovyan/sbm-bp/boost/shared_ptr.hpp:17:0,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:16,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/smart_ptr/shared_ptr.hpp:150:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/jovyan/sbm-bp/boost/function/function_base.hpp:16,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:17,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/jovyan/sbm-bp/boost/shared_ptr.hpp:17:0,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:16,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/smart_ptr/shared_ptr.hpp:279:30: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr(std::auto_ptr<Y> & r): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/jovyan/sbm-bp/boost/function/function_base.hpp:16,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:17,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/jovyan/sbm-bp/boost/shared_ptr.hpp:17:0,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:16,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/smart_ptr/shared_ptr.hpp:323:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/jovyan/sbm-bp/boost/function/function_base.hpp:16,
from /home/jovyan/sbm-bp/boost/function/detail/prologue.hpp:17,
from /home/jovyan/sbm-bp/boost/function/function_template.hpp:13,
from /home/jovyan/sbm-bp/boost/function/detail/maybe_include.hpp:18,
from /home/jovyan/sbm-bp/boost/function/function1.hpp:11,
from /home/jovyan/sbm-bp/boost/program_options/value_semantic.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options/options_description.hpp:13,
from /home/jovyan/sbm-bp/boost/program_options.hpp:15,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
/home/jovyan/sbm-bp/src/main.cpp: In function ‘int main(int, const char**)’:
/home/jovyan/sbm-bp/src/main.cpp:150:71: error: no matching function for call to ‘store(boost::program_options::basic_parsed_options<const char>, boost::program_options::variables_map&)’
po::store(po::parse_command_line(argc, argv, description), var_map);
^
In file included from /home/jovyan/sbm-bp/boost/program_options.hpp:18:0,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/program_options/variables_map.hpp:161:14: note: candidate: void boost::program_options::store(const boost::program_options::basic_parsed_options<char>&, boost::program_options::variables_map&, bool)
void store(const basic_parsed_options<char>& options,
^~~~~
/home/jovyan/sbm-bp/boost/program_options/variables_map.hpp:161:14: note: no known conversion for argument 1 from ‘boost::program_options::basic_parsed_options<const char>’ to ‘const boost::program_options::basic_parsed_options<char>&’
/home/jovyan/sbm-bp/boost/program_options/variables_map.hpp:43:10: note: candidate: void boost::program_options::store(const boost::program_options::basic_parsed_options<wchar_t>&, boost::program_options::variables_map&)
void store(const basic_parsed_options<wchar_t>& options,
^~~~~
/home/jovyan/sbm-bp/boost/program_options/variables_map.hpp:43:10: note: no known conversion for argument 1 from ‘boost::program_options::basic_parsed_options<const char>’ to ‘const boost::program_options::basic_parsed_options<wchar_t>&’
In file included from /usr/include/x86_64-linux-gnu/c++/7/bits/c++allocator.h:33:0,
from /usr/include/c++/7/bits/allocator.h:46,
from /usr/include/c++/7/string:41,
from /usr/include/c++/7/bits/locale_classes.h:40,
from /usr/include/c++/7/bits/ios_base.h:41,
from /usr/include/c++/7/ios:42,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/ext/new_allocator.h: In instantiation of ‘class __gnu_cxx::new_allocator<const char>’:
/usr/include/c++/7/bits/allocator.h:108:11: required from ‘class std::allocator<const char>’
/usr/include/c++/7/bits/basic_string.h:139:14: required from ‘struct std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >::_Alloc_hider’
/usr/include/c++/7/bits/basic_string.h:155:20: required from ‘class std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:43:20: required from ‘boost::program_options::basic_command_line_parser<charT>::basic_command_line_parser(int, charT**) [with charT = const char]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:120:16: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/usr/include/c++/7/ext/new_allocator.h:93:7: error: ‘const _Tp* __gnu_cxx::new_allocator<_Tp>::address(__gnu_cxx::new_allocator<_Tp>::const_reference) const [with _Tp = const char; __gnu_cxx::new_allocator<_Tp>::const_pointer = const char*; __gnu_cxx::new_allocator<_Tp>::const_reference = const char&]’ cannot be overloaded
address(const_reference __x) const _GLIBCXX_NOEXCEPT
^~~~~~~
/usr/include/c++/7/ext/new_allocator.h:89:7: error: with ‘_Tp* __gnu_cxx::new_allocator<_Tp>::address(__gnu_cxx::new_allocator<_Tp>::reference) const [with _Tp = const char; __gnu_cxx::new_allocator<_Tp>::pointer = const char*; __gnu_cxx::new_allocator<_Tp>::reference = const char&]’
address(reference __x) const _GLIBCXX_NOEXCEPT
^~~~~~~
In file included from /usr/include/c++/7/string:52:0,
from /usr/include/c++/7/bits/locale_classes.h:40,
from /usr/include/c++/7/bits/ios_base.h:41,
from /usr/include/c++/7/ios:42,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/bits/basic_string.h: In instantiation of ‘class std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >’:
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:43:20: required from ‘boost::program_options::basic_command_line_parser<charT>::basic_command_line_parser(int, charT**) [with charT = const char]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:120:16: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/usr/include/c++/7/bits/basic_string.h:376:7: error: ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy_chars(_CharT*, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::const_iterator, std::__cxx11::basic_string<_CharT,_Traits, _Alloc>::const_iterator) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::const_pointer = const char*]’ cannot be overloaded
_S_copy_chars(_CharT* __p, const_iterator __k1, const_iterator __k2)
^~~~~~~~~~~~~
/usr/include/c++/7/bits/basic_string.h:372:7: error: with ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy_chars(_CharT*, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::pointer = const char*]’
_S_copy_chars(_CharT* __p, iterator __k1, iterator __k2) _GLIBCXX_NOEXCEPT
^~~~~~~~~~~~~
/usr/include/c++/7/bits/basic_string.h:385:7: error: ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy_chars(_CharT*, const _CharT*, const _CharT*) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc= std::allocator<const char>]’ cannot be overloaded
_S_copy_chars(_CharT* __p, const _CharT* __k1, const _CharT* __k2)
^~~~~~~~~~~~~
/usr/include/c++/7/bits/basic_string.h:381:7: error: with ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy_chars(_CharT*, _CharT*, _CharT*) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
_S_copy_chars(_CharT* __p, _CharT* __k1, _CharT* __k2) _GLIBCXX_NOEXCEPT
^~~~~~~~~~~~~
/usr/include/c++/7/bits/basic_string.h:2115:7: error: ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::replace(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, const _CharT*, const _CharT*) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::const_pointer = const char*]’ cannot be overloaded
replace(__const_iterator __i1, __const_iterator __i2,
^~~~~~~
/usr/include/c++/7/bits/basic_string.h:2104:7: error: with ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::replace(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, _CharT*, _CharT*) [with _CharT = const char; _Traits= std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::const_pointer = const char*]’
replace(__const_iterator __i1, __const_iterator __i2,
^~~~~~~
/usr/include/c++/7/bits/basic_string.h:2137:7: error: ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::replace(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::const_iterator) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::const_pointer = const char*; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >]’ cannot be overloaded
replace(__const_iterator __i1, __const_iterator __i2,
^~~~~~~
/usr/include/c++/7/bits/basic_string.h:2126:7: error: with ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::replace(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::__const_iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::const_pointer = const char*; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; typename __gnu_cxx::__alloc_traits<typename __gnu_cxx::__alloc_traits<_Alloc>::rebind<_CharT>::other>::pointer = const char*]’
replace(__const_iterator __i1, __const_iterator __i2,
^~~~~~~
In file included from /home/jovyan/sbm-bp/boost/program_options/parsers.hpp:227:0,
from /home/jovyan/sbm-bp/boost/program_options.hpp:17,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp: In instantiation of ‘boost::program_options::basic_parsed_options<charT> boost::program_options::basic_command_line_parser<charT>::run() [with charT = const char]’:
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:121:48: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:108:16: error: no matching function for call to ‘boost::program_options::basic_parsed_options<const char>::basic_parsed_options(boost::program_options::parsed_options&)’
return basic_parsed_options<charT>(result);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/jovyan/sbm-bp/boost/program_options.hpp:17:0,
from /home/jovyan/sbm-bp/src/main.cpp:20:
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:34:18: note: candidate: boost::program_options::basic_parsed_options<charT>::basic_parsed_options(const boost::program_options::options_description*) [with charT = const char]
explicit basic_parsed_options(const options_description* description)
^~~~~~~~~~~~~~~~~~~~
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:34:18: note: no known conversion for argument 1 from ‘boost::program_options::parsed_options {aka boost::program_options::basic_parsed_options<char>}’ to ‘const boost::program_options::options_description*’
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:32:11: note: candidate: boost::program_options::basic_parsed_options<const char>::basic_parsed_options(const boost::program_options::basic_parsed_options<const char>&)
class basic_parsed_options {
^~~~~~~~~~~~~~~~~~~~
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:32:11: note: no known conversion for argument 1 from ‘boost::program_options::parsed_options {aka boost::program_options::basic_parsed_options<char>}’ to ‘const boost::program_options::basic_parsed_options<const char>&’
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:32:11: note: candidate: boost::program_options::basic_parsed_options<const char>::basic_parsed_options(boost::program_options::basic_parsed_options<const char>&&)
/home/jovyan/sbm-bp/boost/program_options/parsers.hpp:32:11: note: no known conversion for argument 1 from ‘boost::program_options::parsed_options {aka boost::program_options::basic_parsed_options<char>}’ to ‘boost::program_options::basic_parsed_options<const char>&&’
In file included from /usr/include/x86_64-linux-gnu/c++/7/bits/c++allocator.h:33:0,
from /usr/include/c++/7/bits/allocator.h:46,
from /usr/include/c++/7/string:41,
from /usr/include/c++/7/bits/locale_classes.h:40,
from /usr/include/c++/7/bits/ios_base.h:41,
from /usr/include/c++/7/ios:42,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/ext/new_allocator.h: In instantiation of ‘void __gnu_cxx::new_allocator<_Tp>::deallocate(__gnu_cxx::new_allocator<_Tp>::pointer, __gnu_cxx::new_allocator<_Tp>::size_type) [with _Tp = const char; __gnu_cxx::new_allocator<_Tp>::pointer = const char*; __gnu_cxx::new_allocator<_Tp>::size_type = long unsigned int]’:
/usr/include/c++/7/bits/alloc_traits.h:462:9: required from ‘static void std::allocator_traits<std::allocator<_CharT> >::deallocate(std::allocator_traits<std::allocator<_CharT> >::allocator_type&, std::allocator_traits<std::allocator<_CharT> >::pointer, std::allocator_traits<std::allocator<_CharT> >::size_type) [with _Tp = const char; std::allocator_traits<std::allocator<_CharT> >::allocator_type = std::allocator<const char>; std::allocator_traits<std::allocator<_CharT> >::pointer = const char*; std::allocator_traits<std::allocator<_CharT> >::size_type = long unsigned int]’
/usr/include/c++/7/bits/basic_string.h:226:34: required from ‘void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_destroy(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type = long unsigned int]’
/usr/include/c++/7/bits/basic_string.h:221:14: required from ‘void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_dispose() [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/usr/include/c++/7/bits/basic_string.h:647:19: required from ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::~basic_string() [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:24:17: required from ‘std::vector<std::__cxx11::basic_string<_CharT> > boost::program_options::detail::make_vector(Iterator, Iterator) [with charT = const char; Iterator = const char**]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:43:56: required from ‘boost::program_options::basic_command_line_parser<charT>::basic_command_line_parser(int, charT**) [with charT = const char]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:120:16: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/usr/include/c++/7/ext/new_allocator.h:125:19: error: invalid conversion from ‘const void*’ to ‘void*’ [-fpermissive]
::operator delete(__p);
~~~~~~~~~~~~~~~~~^~~~~
In file included from /usr/include/c++/7/bits/exception_ptr.h:40:0,
from /usr/include/c++/7/exception:142,
from /usr/include/c++/7/ios:39,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/new:124:6: note: initializing argument 1 of ‘void operator delete(void*)’
void operator delete(void*) _GLIBCXX_USE_NOEXCEPT
^~~~~~~~
In file included from /usr/include/c++/7/ios:40:0,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/bits/char_traits.h: In instantiation of ‘static constexpr void __gnu_cxx::char_traits<_CharT>::assign(__gnu_cxx::char_traits<_CharT>::char_type&, const char_type&) [with _CharT = const char; __gnu_cxx::char_traits<_CharT>::char_type = const char]’:
/usr/include/c++/7/bits/basic_string.h:338:23: required from ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type) [with _CharT = constchar; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>; std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type = long unsigned int]’
/usr/include/c++/7/bits/basic_string.h:382:16: required from ‘static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy_chars(_CharT*, _CharT*, _CharT*) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc =std::allocator<const char>]’
/usr/include/c++/7/bits/basic_string.tcc:225:6: required from ‘void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_construct(_InIterator, _InIterator, std::forward_iterator_tag) [with _FwdIterator = const char*; _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/usr/include/c++/7/bits/basic_string.h:236:23: required from ‘void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_construct_aux(_InIterator, _InIterator, std::__false_type) [with _InIterator = const char*; _CharT = const char; _Traits= std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/usr/include/c++/7/bits/basic_string.h:255:20: required from ‘void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_construct(_InIterator, _InIterator) [with _InIterator = const char*; _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/usr/include/c++/7/bits/basic_string.h:511:21: required from ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const _CharT*, const _Alloc&) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:24:17: required from ‘std::vector<std::__cxx11::basic_string<_CharT> > boost::program_options::detail::make_vector(Iterator, Iterator) [with charT = const char; Iterator = const char**]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:43:56: required from ‘boost::program_options::basic_command_line_parser<charT>::basic_command_line_parser(int, charT**) [with charT = const char]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:120:16: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/usr/include/c++/7/bits/char_traits.h:97:14: error: assignment of read-only reference ‘__c1’
{ __c1 = __c2; }
~~~~~^~~~~~
In file included from /usr/include/c++/7/bits/char_traits.h:39:0,
from /usr/include/c++/7/ios:40,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from /home/jovyan/sbm-bp/src/main.cpp:14:
/usr/include/c++/7/bits/stl_algobase.h: In instantiation of ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = const char*]’:
/usr/include/c++/7/bits/stl_algobase.h:422:45: required from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = const char*]’
/usr/include/c++/7/bits/stl_algobase.h:455:8: required from ‘_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI =const char*]’
/usr/include/c++/7/bits/char_traits.h:196:16: required from ‘static __gnu_cxx::char_traits<_CharT>::char_type* __gnu_cxx::char_traits<_CharT>::copy(__gnu_cxx::char_traits<_CharT>::char_type*, const char_type*, std::size_t) [with _CharT = constchar; __gnu_cxx::char_traits<_CharT>::char_type = const char; std::size_t = long unsigned int]’
/usr/include/c++/7/bits/basic_string.h:536:23: required from ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = const char; _Traits = std::char_traits<const char>; _Alloc = std::allocator<const char>]’
/usr/include/c++/7/ext/new_allocator.h:136:4: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/c++/7/bits/vector.tcc:100:30: required from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with_Args = {std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >}; _Tp = std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >; _Alloc = std::allocator<std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >]’
/usr/include/c++/7/bits/stl_vector.h:954:21: required from ‘void std::vector<_Tp, _Alloc>::push_back(std::vector<_Tp, _Alloc>::value_type&&) [with _Tp = std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >; _Alloc = std::allocator<std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> > >; std::vector<_Tp, _Alloc>::value_type = std::__cxx11::basic_string<const char, std::char_traits<const char>, std::allocator<const char> >]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:24:17: required from ‘std::vector<std::__cxx11::basic_string<_CharT> > boost::program_options::detail::make_vector(Iterator, Iterator) [with charT = const char; Iterator = const char**]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:43:56: required from ‘boost::program_options::basic_command_line_parser<charT>::basic_command_line_parser(int, charT**) [with charT = const char]’
/home/jovyan/sbm-bp/boost/program_options/detail/parsers.hpp:120:16: required from ‘boost::program_options::basic_parsed_options<charT> boost::program_options::parse_command_line(int, charT**, const boost::program_options::options_description&, int, boost::function1<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, const std::__cxx11::basic_string<char>&>) [with charT = const char]’
/home/jovyan/sbm-bp/src/main.cpp:150:61: required from here
/usr/include/c++/7/bits/stl_algobase.h:386:44: error: no matching function for call to ‘std::__copy_move<false, true, std::random_access_iterator_tag>::__copy_m(const char*&, const char*&, const char*&)’
return std::__copy_move<_IsMove, __simple,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_Category>::__copy_m(__first, __last, __result);
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algobase.h:357:9: note: candidate: template<class _Tp> static _Tp* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(const _Tp*, const _Tp*, _Tp*) [with _Tp = _Tp; bool _IsMove = false]
__copy_m(const _Tp* __first, const _Tp* __last, _Tp* __result)
^~~~~~~~
/usr/include/c++/7/bits/stl_algobase.h:357:9: note: template argument deduction/substitution failed:
/usr/include/c++/7/bits/stl_algobase.h:386:44: note: deduced conflicting types for parameter ‘_Tp’ (‘char’ and ‘const char’)
return std::__copy_move<_IsMove, __simple,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_Category>::__copy_m(__first, __last, __result);
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: *** [src/CMakeFiles/bp.dir/build.make:80: src/CMakeFiles/bp.dir/main.cpp.o] Error 1
make[2]: Leaving directory '/home/jovyan/sbm-bp'
make[1]: *** [CMakeFiles/Makefile2:111: src/CMakeFiles/bp.dir/all] Error 2
make[1]: Leaving directory '/home/jovyan/sbm-bp'
make: *** [Makefile:101: all] Error 2I checked main.cpp and it seems that something is wrong with boost's program_options?
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