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jcel's Introduction

  • ๐Ÿ‘‹ Hi, I'm @julianmendez .
  • ๐Ÿ‘€ I'm interested in logic, mathematics, and computer science.
  • ๐ŸŒฑ I'm currently learning about proof checkers.
  • ๐Ÿ’ž๏ธ I'm looking to collaborate on ethics and artificial intelligence.
  • ๐Ÿ“ซ How to reach me : https://www.umu.se/en/staff/julian-mendez/

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jcel's Issues

jcel version (0.25?)

the latest jcel version was released in 2016.
If possible, release a new version so that it is automatically imported into the latest version of protege

TranslationException error when normalizing ontology.

Hello. I have tried to normalize the ontology found here but I get this error:

de.tudresden.inf.lat.jcel.owlapi.translator.TranslationException: de.tudresden.inf.lat.jcel.owlapi.translator.TranslationException: Object cannot be translated: 'ObjectUnionOf(<http://purl.obolibrary.org/obo/UBERON_0001299> <http://purl.obolibrary.org/obo/UBERON_0006653>)'.

I also have a modified version of the previous ontology that can be downloaded from here. In this case I get this error:

de.tudresden.inf.lat.jcel.owlapi.translator.de.tudresden.inf.lat.jcel.owlapi.translator.TranslationException: de.tudresden.inf.lat.jcel.owlapi.translator.TranslationException: The translation map is incomplete. Item id was not found: 'https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships'

This is. my code:

from de.tudresden.inf.lat.jcel.owlapi.main import JcelReasoner
from org.semanticweb.owlapi.apibinding import OWLManager

ont_manager = OWLManager.createOWLOntologyManager()
ontology = ont_manager.loadOntologyFromOntologyDocument(java.io.File("ontology_path"))
jreasoner = JcelReasoner(ontology, False)

The code is written in Python but I am using JPype to interface with Java.
Would you please help me to figure out what is happening?

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