juliahealth / ctakesparser.jl Goto Github PK
View Code? Open in Web Editor NEWJulia package to parse the output of Apache cTAKES (clinical text analysis and knowledge extraction system)
License: Other
Julia package to parse the output of Apache cTAKES (clinical text analysis and knowledge extraction system)
License: Other
I really want this tool to work, and running Julia 1.7 I get:
julia> Pkg.add(url="https://github.com/bcbi/CTakesParser.jl.git")
Updating git-repo https://github.com/bcbi/CTakesParser.jl.git
Resolving package versions...
No Changes to C:\Users\dbknox1\.julia\environments\v1.7\Project.toml
No Changes to C:\Users\dbknox1\.julia\environments\v1.7\Manifest.toml
julia> dir_in="c:\nlpi\100\"
"c:\nlpi\100\"
julia> dir_out="c:\nlpi\outputjulia\"
"c:\nlpi\outputjulia\"
julia> parse_output_dir(dir_in, dir_out)
ERROR: UndefVarError: parse_output_dir not defined
Stacktrace:
[1] top-level scope
@ REPL[11]:1
Any ideas or help is greatly appreciated
Hi
Processed clinical text using CTAKES 4.0 and tried YTEX to store the information to DB. But not working correctly. Now I am trying to parse the xmi file using this module but unable to. I am using julia version 1.0.3 in juliabox.com.
I am new to Julia.
Need more information to use this module.
Can you please help me regarding this.
any help will be appreciated.
Thanks in advance.
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