Giter Club home page Giter Club logo

daisiemainland_ms's Introduction

Hi ๐Ÿ‘‹

I'm Josh, an evolutionary biologist ๐Ÿงฌ ๐Ÿธ, turned research software engineer ๐Ÿ’ป.

I'm currently working at the The London School of Hygiene & Tropical Medicine (LSHTM) on the Epiverse initiative, and finishing my PhD at the University of Groningen. My PhD is on the topic of developing novel phylogenetic models to understand macroevolutionary patterns on islands โ›ฐ๏ธ.

  • ๐Ÿ”ญ Iโ€™m currently working on: Epiverse by day, macroevolution and island biogeography by night.
  • ๐ŸŒฑ Iโ€™m currently learning: most things, but mainly epidemiology of infectious diseases.
  • ๐Ÿ‘ฏ Iโ€™m looking to collaborate on: interesting research questions at the intersection of evolutionary biology and epidemiology.
  • ๐Ÿค” Iโ€™m looking for help with: not sure ... but fun collaborators are always welcome ๐Ÿ˜ƒ
  • ๐Ÿ’ฌ Ask me about: anything!
  • ๐Ÿ“ซ How to reach me: [email protected]
  • ๐Ÿ˜„ Pronouns: he/him
  • โšก Fun fact: I'm a fan of all things Monocle

Email Twitter

snake gif

daisiemainland_ms's People

Contributors

joshwlambert avatar richelbilderbeek avatar

Watchers

 avatar

daisiemainland_ms's Issues

Reduce jargon in summary

RJCB: To quote JOSS guidelines: 'Begin your paper with a summary of the high-level functionality of your software for a non-specialist reader. Avoid jargon in this section' (emphasis mine). I feel there is too much jargon in this section, and here is my suggestion to reduce it

Make paper less detailed

RJCB: I feel the paper is too detailed in general. I suggest to show what the package does and explaining from there. I suggest to show these aspects, that I quote from the summary:]

(1) simulate the evolutionary history on islands, (2) visualise that history,
(3) calculate and plot summary metrics of the simulated data

Review on 2022-04-21

No vignettes

After

remotes::install_github("joshwlambert/DAISIEmainland")

and checking the vignettes, I find there are no vignettes:

> vignette(package = "DAISIEmainland")
no vignettes found

I think a devtools::build_vignettes() for the package would fix this, but building vignettes -as far as I can remember- changed and was finicky.

Too much words

I quote from joss_guidelines.md:

The paper should be between 250-1000 words. Authors submitting papers significantly longer than 1000 words may be asked to reduce the length of their paper.

Here we have approximately 1330 words:

wc paper.md --words
1330 paper.md

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.