Comments (5)
richelbilderbeek
commented on July 24, 2024
plot_daisie_data is definitely invalid, as the vertical lines branches are in their pre-reverse state:
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richelbilderbeek
commented on July 24, 2024
It seems that daisie_data$branching_times now holds the time in 'time before present' (instead of: time after island coming into existence). This means that all results of min and max are now under suspicion 🧐
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richelbilderbeek
commented on July 24, 2024
The only change needed to make the vertical lines be correct:
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richelbilderbeek
commented on July 24, 2024
Fix colonisation times, highlighting the only change:
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richelbilderbeek
commented on July 24, 2024
Fixed!
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Related Issues (20)
- Remove link to Tidyverse coding standard? HOT 1
- Write read_results function
- change plotting functions to use results and not read the results in the plotting function
- Finish plot_island_tbl on tree_plots branch HOT 7
- fix the build on fix_check branch HOT 1
- Check whether island_to_table, ideal_island_to_table and empirical_island_to_table can be deleted
- add labels argument to plots
- Write function to create `ideal_island_tbl` and `emperical_island_tbl` from `island_tbl` HOT 6
- Resurrect island_to_tables and daisie_data_to_tables for V2? HOT 3
- add tidyverse style check to tests HOT 1
- Add `plot_daisie_mainland_data` HOT 4
- Color clades based on stac_str HOT 1
- Use time before present + plot recolonisations HOT 7
- Changing `plot_mainland` x-axis to time before present HOT 8
- plot_daisie_mainland_data: reverse time axis HOT 5
- Plot all recolonisations in 'plot_daisie_mainland_data' HOT 23
- No branching for colonist that underwent anagenesis? HOT 2
- Numerical integrator use HOT 1
- Island plot legend HOT 1
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