Summary statistics: https://s3-us-west-2.amazonaws.com/t1d-gwas/GWAS/Chiou_2020.T1D.sumstats.txt.gz
99% credible sets: https://s3-us-west-2.amazonaws.com/t1d-gwas/GWAS/Chiou_2020.T1D.99_credible_set.bed.gz

https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/GCGhigh_alpha.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/GCGlow_alpha.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/INShigh_beta.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/INSlow_beta.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/SSThigh_delta.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/SSTlow_delta.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/acinar.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/activated_CD4_T.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/activated_CD8_T.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/activated_stellate.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/adaptive_NK.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/classical_monocyte.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/cytotoxic_NK.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/ductal.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/endothelial.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/gamma.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/megakaryocyte.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/memory_B.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/myeloid_dendritic.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/naive_B.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/naive_CD4_T.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/naive_CD8_T.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/nonclassical_monocyte.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/pancreatic_CD8_T.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/pancreatic_macrophage.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/plasmacytoid_dendritic.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/quiescent_stellate.bw
https://s3-us-west-2.amazonaws.com/t1d-gwas/signal_tracks/regulatory_T.bw

https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/GCGhigh_alpha.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/GCGlow_alpha.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/INShigh_beta.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/INSlow_beta.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/SSThigh_delta.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/SSTlow_delta.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/acinar.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/activated_CD4_T.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/activated_CD8_T.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/activated_stellate.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/adaptive_NK.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/classical_monocyte.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/conventional_dendritic.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/cytotoxic_NK.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/ductal.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/endothelial.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/gamma.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/megakaryocyte.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/memory_B.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/naive_B.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/naive_CD4_T.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/naive_CD8_T.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/nonclassical_monocyte.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/pancreatic_CD8_T.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/pancreatic_macrophage.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/plasmacytoid_dendritic.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/quiescent_stellate.cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/cCREs/regulatory_T.cCREs.bed.gz

https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/GCGhigh_alpha.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/GCGlow_alpha.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/INShigh_beta.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/INSlow_beta.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/SSThigh_delta.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/SSTlow_delta.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/acinar.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/activated_CD4_T.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/activated_CD8_T.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/activated_stellate.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/adaptive_NK.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/classical_monocyte.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/conventional_dendritic.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/cytotoxic_NK.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/ductal.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/endothelial.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/gamma.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/megakaryocyte.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/memory_B.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/naive_B.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/naive_CD4_T.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/naive_CD8_T.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/nonclassical_monocyte.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/pancreatic_CD8_T.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/pancreatic_macrophage.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/plasmacytoid_dendritic.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/quiescent_stellate.specific_cCREs.bed.gz
https://s3-us-west-2.amazonaws.com/t1d-gwas/specific_cCREs/regulatory_T.specific_cCREs.bed.gz

https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/GCGhigh_alpha.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/GCGlow_alpha.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/INShigh_beta.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/INSlow_beta.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/SSThigh_delta.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/SSTlow_delta.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/acinar.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/activated_CD4_T.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/activated_CD8_T.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/activated_stellate.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/adaptive_NK.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/classical_monocyte.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/conventional_dendritic.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/cytotoxic_NK.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/ductal.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/endothelial.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/gamma.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/megakaryocyte.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/memory_B.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/naive_B.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/naive_CD4_T.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/naive_CD8_T.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/nonclassical_monocyte.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/pancreatic_CD8_T.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/pancreatic_macrophage.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/plasmacytoid_dendritic.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/quiescent_stellate.cicero.coaccess_05.bed
https://s3-us-west-2.amazonaws.com/t1d-gwas/co-accessibility/regulatory_T.cicero.coaccess_05.bed

https://s3-us-west-2.amazonaws.com/t1d-gwas/motif_enrichment/chromVAR.JASPAR_2018.txt.gz

UMAP coordinates: https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.UMAP_coords.txt
Color scheme: https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.color_scheme.txt
Single cell metadata: https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.metadata.txt
Single cell peak matrix (sparse matrix in MM format): https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.peaks.mtx.gz
Single cell peak matrix barcode labels: https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.barcodes.txt
Single cell peak matrix peak labels: https://s3-us-west-2.amazonaws.com/t1d-gwas/sc_browser/T1D_snATAC.peaks.txt