This repository contains all scripts used for the population genomic analysis of immune genes in a contemporary population of Bombus terrestris males sampled across Ireland. This project was supported by a Department of Agriculture, Food, and the Marine (DAFM) Conservation of Genetic Resources grant with assistance from the Irish Research Council (IRC) and the Deutsche Bundesstiftung Umwelt (DBU). Computational analyses were supported by the Irish Centre for High-End Computing (ICHEC).
Findings are reported in the following manuscript:
Larragy, S.J., Möllmann, J.S., Stout, J., Carolan, J.C., Colgan, T.J.
Signatures of adaptation, constraints, and potential redundancy in the canonical immune genes of a key pollinator. Genome Biology & Evolution (2023).
This work is distributed under the GPLv3 license. Reuse of code derived from this repository is permitted under two conditions:
- Proper attribution (i.e., citation of the associated publication; see CITATION.cff and above).
- Publication of reused scripts on an open-access platform, such as Github.