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Jakob Nikolas Kather's Projects

angiogeniczone icon angiogeniczone

Distribution analysis of CD34-stained blood vessels in histopathological whole slide images

color-mri icon color-mri

Color-based visualization of multiparametric MRI data

deep-stroma-histology icon deep-stroma-histology

Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer

deephistology icon deephistology

A pan-cancer platform for mutation prediction from routine histology

histogan icon histogan

Generative adversarial networks for histology images

imagenebula icon imagenebula

Automatically exported from code.google.com/p/imagenebula

immunetopography icon immunetopography

Analyze topography of tumor-infiltrating immune cells in histological images (QuPath/Matlab)

immuno_literature icon immuno_literature

Cancer immunotherapy literature analysis (PubMed papers and registered clinical trials)

immunoabm icon immunoabm

an agent-based model of tumor cell - immune cell interactions

labs icon labs

Scripts for the PH525x: Data Analysis for Genomics

msifromhe icon msifromhe

predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer

new-colors-histology icon new-colors-histology

Source codes for: "New colors for histology: optimized bivariate color maps increase perceptual contrast in histological images"

qupath icon qupath

QuPath - Open Source Digital Pathology

virusfromhe icon virusfromhe

Detecting virus presence in hematoxylin and eosin histology images

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