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daisybell's Issues

Allow configuration via a file

Is your feature request related to a problem? Please describe.
Rather than passing config information via flags, it would be convenient to be able to provide options via a config file.

Describe the solution you'd like
There are a variety of configuration options that can be provided and they can be very verbose. abstracting them out of a config file(something like daisybell.cfg) would be ideal. I would ssuggest using yaml and allowing the config to be an array so tha tmultiple runs could be defined at one

Describe alternatives you've considered
None

Additional context
None

Improve secure use of Jupyter Notebook

Is your feature request related to a problem? Please describe.
Currently, multiple IP's can listen to the notebook server, which means passwords are vulnerable.

Describe the solution you'd like
Docker secrets enables you to centrally manage sensitive data, such as passwords, and limit the containers that have access to this data. Ultimately, using docker secrets would improve password security.

Dependency Dashboard

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.

Errored

These updates encountered an error and will be retried. Click on a checkbox below to force a retry now.

  • Update dependency pandas to v2.2.2

Open

These updates have all been created already. Click a checkbox below to force a retry/rebase of any.

Detected dependencies

dockerfile
Dockerfile
  • nvidia/cuda 12.2.2-cudnn8-runtime-ubuntu22.04
github-actions
.github/workflows/codeql-analysis.yml
  • actions/checkout v4
  • github/codeql-action v3
  • github/codeql-action v3
  • github/codeql-action v3
.github/workflows/docker-test.yml
  • actions/checkout v4
.github/workflows/docker.yml
  • actions/checkout v4
  • docker/setup-qemu-action v3
  • docker/setup-buildx-action v3
  • docker/build-push-action v5
.github/workflows/pypi.yml
  • actions/checkout v4
  • snok/install-poetry v1
.github/workflows/python-package.yml
  • actions/checkout v4
  • actions/setup-python v5
  • snok/install-poetry v1
  • codecov/codecov-action v4
.github/workflows/secrets-scan.yml
  • actions/checkout v4
.github/workflows/semgrep.yml
  • actions/checkout v4
  • actions/github-script v7
  • actions/upload-artifact v4.3.3
pep621
pyproject.toml
poetry
pyproject.toml
  • python >=3.8,<3.13
  • torch 2.3.0
  • transformers ^4.38.2
  • pandas ^2.0.2
  • tabulate ^0.9.0
  • dataframe-image ^0.2.2
  • seqeval ^1.2.2
  • datasets ^2.19.1
  • tensorboard ^2.13.0
  • pysbd ^0.3.4
  • grpcio <1.63.1
  • sentencepiece ^0.2.0
  • protobuf ^5.26.0
  • pytest 8.2.0
  • pytest-cov 5.0.0
  • pdbpp ^0.10.3
  • ruff ^0.4.4
  • black ^24.3.0
  • pyright 1.1.362

  • Check this box to trigger a request for Renovate to run again on this repository

Containerization

Is your feature request related to a problem? Please describe.
It would be convenient to be able to use the application via Docker

Describe the solution you'd like
Please provide a dockerfile and instructions for use

Describe alternatives you've considered
None

Additional context
None

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