3D implementation of The Symbol Nomenclature For Glycans (SNFG) for UCSF Chimera
Based on 3D-SNFG.tcl, by David F. Thieker and Jodi A. Hadden.
Original publication:
3D Implementation of the Symbol Nomenclature for Graphical Representation of Glycans
D.F. Thieker, J.A. Hadden, K. Schulten, and R.J. Woods
Glycobiology, 2016
Help of Oliver Grant is kindly acknowledged.
Refer to the Tangram Suite documentation for further details. In particular:
Feel free to create an issue in this repository.
Hello, I was wondering if this works for ChimeraX, the predecessor for Chimera, as well? If so, is the installation method the same?
Hello,
I managed to visualize monosaccharides like SIA and mannose just fine. However when I have polysaccharides, snfg doesn't recognize them?
Also, when I do matchmaker on 2 proteins, it seems the SNFG representations stay at the original positions instead of the new location of the glycans.
Hi,
I have no messages of error but when applying the 3d-snfg nothing happens. the id of the pdb is 1b3z
thanks
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