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DrAC - Drug Annotator for Common data model

A solution for extracting Patients' information from clinical notes and exporting it to an OMOP CDM database.

• Annotate medication information in clinical notes
• Harmonise the resulting information into their standard definition
• Store extracted drug information into the OMOP CDM

More documentation about the system is available here.

• João R. Almeida¹²
• João F. Silva¹
• Sérgio Matos¹
• José L. Oliveira¹

1. University of Aveiro, Dept. Electronics, Telecommunications and Informatics (DETI / IEETA), Aveiro, Portugal ↩
2. University of A Coruña, Dept. of Information and Communications Technologies, A Coruña, Spain ↩

Please cite the following, if you use DrAC in your work:

João Rafael Almeida, João Figueira Silva, Sérgio Matos, José Luís Oliveira, A two-stage workflow to extract and harmonize drug mentions from clinical notes into observational databases, Journal of Biomedical Informatics, Volume 120, 2021, 103849, ISSN 1532-0464, DOI: 10.1016/j.jbi.2021.103849

Please let us know if there are any issues.

DrAC is under GPL-3.0 license. For more information, click here.