hredestig Goto Github PK

2016-09-05-software-carpentry

airflow

Apache Airflow

auditwheel

Auditing and relabeling cross-distribution Linux wheels.

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

cobrapy

COBRApy is a package for constraint-based modeling of biological networks

conf

just my config files for various programs i use

cookiecutter-decaf-python

a cookiecutter based on cookiecutter-pypackage

crmn

crmn: CCMN and other noRMalizatioN methods for metabolomics data

driven

Data-Driven Constraint-based analysis

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

ess

Git development branch

ggefp

Render eFP browser-like visualizations in R

goodtables-py

Validate tabular data in Python

libchebipy

libChEBIpy: a Python API for accessing the ChEBI database

metmask

Legacy tool for organizing identifiers for small molecules (metabolites)

nvgpu

NVIDIA GPU tools - monitoring on CLI & web app with multiple agents

optlang

optlang - sympy based mathematical programming language

org-info-js

Sebastian Rose's org-info-js

pcamethods

Perform PCA on data with missing values in R

python-libsbml

standalone python package of libsbml with support for SBML core and accepted packages.

python_boilerplate_decaf

r-novice-analysis-viz

rols

An R package to query EBI's Ontology Lookup Service (OLS) using Simple Object Access Protocol (SOAP).

rosettr

A high-throughput affordable in vitro growth assay for Arabidopsis

rstan

RStan, the R interface to Stan

swiglpk

Simple swig bindings for the GNU Linear Programming Kit

trainmet

Compute associations in short timeseries using the method published in Redestig and Costa (2011) Bioinformatics