hinerm Goto Github PK

imglyb

Connecting Java/ImgLib2 + Python/NumPy

incubator

Where development happens and stuff breaks 🛠️

itk

jex

Java-based software and GUI to automatically manage/database large numbers of files (e.g., images) in a transparent file structure and perform batch processing with standard tools (ImageJ, R, Octave, Weka).

jfilament

Active countour based segmentation. FIJI plugin.

jgo

Launch Java code from the CLI, installation-free. ☕

jitk-tps

A java port of the ITK thin plate spline implementation.

jogl-minimal

jpype

JPype is cross language bridge to allow python programs full access to java class libraries.

jvrpn

Mavenized version of VRPN, including native artifacts

legospike

Programs for Lego SPIKE Prime

license-maven-plugin

Maven plugin to download and collect license files from project dependencies.

localhook-server

Localhook let you receive webhooks behind a firewall.

morpholibj

Collection of mathematical morphology methods and plugins for ImageJ

mtrack

Microtubule tracker@V Kapoor

multiview-reconstruction

Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

multiview-simulation

Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise

openmicroscopy

OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.

packages_test

Just trying to troubleshoot GitHub packages...

piercedveil

pom-mcve

A minimal test of dependency management overriding when inheriting multiple versions of the same BOM.

prokaryote

CellProfiler’s Java dependencies

pyimagej

Use ImageJ from Python

scijava-common

A plugin framework and application container with built-in extensibility mechanism :electric_plug:

sciview

sciview is an ImageJ-based tool for visualization and interaction with ND data

scyjava

⚡ Supercharged Java access from Python ⚡

sitk-java-helper

Bundles SimpleITK native libraries and ensures they are available to Java processes

snpeff

spirvcrossj

Java bindings for SPIRV-cross and glslang

test

test repo for backup script