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mk_daymet_mx_mun_mont

extract daymet mont average info for mx municipal

mk_gtka_baserecalibrator

Base Recalibration of a bunch of bam files using GTKA BaseRecalibrator

mk_gtka_haplotypecaller

Call variants per sample using GTKA HaplotypeCaller.

mk_picard_markduplicates

Mark Duplicates of a bunch of bam files using Picard

mk_pindel

Automation Pindel detection of breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data

mk_star_index

Generate STAR index using mk

mk_star_singleend

mk auntomatizatión of single end alignment whit star

mk_svaba

MK - Structural variation and indel analysis by assembly

nodos-prueba

programacion-en-python

Notas del taller

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera

r_basics_workshop

reproducibility_exercise

Ejercicio de reproducibilidad con RStudio

snpcolaps

Collapsator from a defined order of several columns. Useful, for example, to get duplicates of a BAM file.

vbi_clusterprofiler

# Introducción a clusterProfiler

vcf-filter

Filter vcf files based in a bed file using tabix

vcfpairwise

Pairwise .vcf files using vcftools