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enrichr

Functional Enrichment Analysis and Network Construction

eoffice

Export and import graphics and tables to MicroSoft office

excelerate-scrnaseq

Single RNA-seq data analysis with R (Finland, May, 2019)

ezbiocloud_database

ezbiocloud database for the microbial

faster

Fast Lane to Learning R!

fucking-algorithm

刷算法全靠套路，认准 labuladong 就够了！English version supported! Crack LeetCode, not only how, but also why.

gcforest

This is the official implementation for the paper 'Deep forest: Towards an alternative to deep neural networks'

gff2gene

Plot gene structure

ggfittext

🔠 ggplot2 geoms to fit text into boxes

ggformat

Provide consistent format for publication

gggsea

GSEA plots in ggplot2

gwas

GWAS related things

gwas_benchmark

A set of tools for benchmarking or evaluating GWAS algorithms. A detailed description can be found in C. Widmer et al., Scientific Reports 2014.

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

ibd

krakentools

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

ligand-receptor-pairs

Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.

lihang-code

《统计学习方法》的代码实现

lrasmanuscript

Reproducible Analyses accompanying DADA2 + PacBio Manuscript

machine-learning-andrew-ng

Full Notes of Andrew Ng's Coursera Machine Learning.

machine-learning-by-andrew-ng-in-python

Documenting my python implementation of Andrew Ng's Machine Learning course

machine-learning-collection

A resource for learning about Machine learning & Deep Learning

microbial

Do microbiome analysis with dada2 and phyloseq object

modern-cpp-tutorial

📚 Modern C++ Tutorial: C++11/14/17/20 On the Fly | https://changkun.de/modern-cpp/

monocle3

mpal-single-cell-2019

Publication Page for MPAL Paper 2019

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

ngs

List everything related with NGS

nndl.github.io

《神经网络与深度学习》 邱锡鹏著 Neural Network and Deep Learning

numerical-linear-algebra

Free online textbook of Jupyter notebooks for fast.ai Computational Linear Algebra course