Just a collection of a few analysis scripts I've written to deal with data from cBioPortal and DepMap to try to prioritize essential pairs of genes. This is mostly focused around PTEN, as the paper that started this was around PTEN-null cells, but the same methods are valid for any genes.
gomezlab / pten_null_essential Goto Github PK
View Code? Open in Web Editor NEWCode for searching a few databases for apparent essential pairs in cancer data