Comments (9)
from gfa-spec.
👍
from gfa-spec.
👍 (is my vote implied?)
from gfa-spec.
@ekg @jts @lh3 @noporpoise @pb-jchin Sound good?
from gfa-spec.
👍
from gfa-spec.
I usually don't like the majority rule on specification. Depending on the type of the issue, the majority don't necessarily make the best choice. It would be good for everyone to try to seek consensus. Let's see how often this doesn't work out and then decide if we have to force the majority rule.
from gfa-spec.
Unanimous agreement is certainly preferable. Let's see what happens. I wanted to jot down some criteria so that I'm not merging changes to the spec based on my own whim.
from gfa-spec.
Just a note that I'm on vacation this week so unlikely to contribute much. I'm with @lh3 in that we should only introduce a majority rule if we often can't reach consensus. The rules about waiting to merge and requiring endorsement from others are fine though.
from gfa-spec.
This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs.
from gfa-spec.
Related Issues (20)
- Need to specify "reference" in terms of cigar operations in overlap HOT 4
- Do two genes link together in GFA file indicate these two genes associate with each other? HOT 2
- Should a PG line (like in SAM) be codified in the spec? HOT 3
- GFA2: does not mention the encoding expected of file content (ASCII-7bit, UTF-8, etc.) HOT 1
- v1.1 is not semantically distinct from v1 HOT 2
- W lines: no description of '>' and '<' use HOT 2
- Use of GFA2 as a pangenome reference
- Representation of annotations in a GFA2/GFA3 file
- Segment names conflicts in spec
- alignments to graphs HOT 7
- GFA2: clarify in the grammar that '*' in alternations is a terminal HOT 15
- GFA2: grammar for end positions is unclear HOT 9
- What do P lines with zero, one or two Segment ids mean in GFA v1? HOT 11
- Namespace for S and P lines in GFA1 HOT 1
- Indicating that a path is circular HOT 2
- manipulating .gfa file HOT 5
- Implied adjacent objects in GFA2 groups are problematic HOT 3
- GFA2 specification does not mention optional field reserved tags HOT 4
- making path overlap cigar list optional HOT 3
- GFA has been submitted to the EDAM ontology HOT 1
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from gfa-spec.