geng-lee Goto Github PK

10x_2nd_analysis_shinyapp

Build a shiny application using Docker

2019_doan_pnas

Label-free assessment of red blood cell storage lesions by deep learning

29_08_2021

Tool that matches the mass spectrum peaks to the corresponding protein fragments

a-robust-method-for-detecting-positive-selection-on-regulatory-sequences

We present an in silico mutagenesis based approach to transcription factor binding sites evolution, based on a machine learning model of binding.

abe_noncoding_functional_score

A base editor, function score framework, original code

aceseqworkflow

Allele-specific copy number estimation with whole genome sequencing

acr

adminlte

AdminLTE - Free admin dashboard template based on Bootstrap 4

ago-par-clip_annotation_pipeline

Pipeline for automatic analysis and annotation of any given SRR dataset with PARalyzer and human genome transcript-level annotation.

ai-course-flutter

互动课程语音交互前端-flutter，动态解析场景脚本满足不同的设计需求。

ai_components

AI parts on Healthcare and Genetic Data

alkylatingagentresistanceanalysis

alphafold

Open source code for AlphaFold.

alphafold-analyser

A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions

alphafold-analysis

scripts to visualise results of alphafold and alphafold multimer runs

aminesearch

CRISPR base editing library design from clinical sequencing data

ampk_motif_analyzer

A position weight matrix based algorithm to score query phosphorylation motifs on similarity to the in vivo AMPK phosphorylation motifs.

annotated_deep_learning_paper_implementations

🧠 Implementations/tutorials of deep learning papers with side-by-side notes; including transformers (original, xl, switch, feedback), optimizers(adam, radam, adabelief), gans(dcgan, cyclegan, stylegan2), reinforcement learning (ppo, dqn), capsnet, sketch-rnn, etc.

artificial-intelligence

Awesome AI Learning with +100 AI Cheat-Sheets, Free online Books, Top Courses, Best Videos and Lectures, Papers, Tutorials, +99 Researchers, Premium Websites, +121 Datasets, Conferences, Frameworks, Tools

artificial-intelligence-1

Awesome Artificial Intelligence Projects

artificial-intelligence-group

Artificial Intelligence Group is a collective effort to bring a strong AI community together, starting within Lithuania.

artifusion

ArtiFusion is a tool to simulate artificial fusion events by modifying a given reference genome. The tool copies parts of the exonic sequence of gene A within the reference genome FASTA sequence into the downstream region of gene B and replaces the copied regions of gene A with Ns. The breakpoints are defined by using a size ratio between gene A an

as-global-regulator

Identifying global regulator of alternative splicing (exon skipping) with Smart-seq2 data

asereadcounter_star

Preprocessing sequencing data for allele-specific analysis

atac-pipe

Analysis pipeline for ATAC-seq Data

atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

atacflow

An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter

atacproc

ATAC-seq processing pipeline

atacseq

ATAC-seq peak-calling, QC and differential analysis pipeline

atacseq_pipeline