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s6juncheng avatar s6juncheng commented on July 27, 2024

Thanks for using our tool. We are predicting delta_logit_psi, which is the logit PSI score change for exon skipping events. Alternative 3'end / 5'end events can also be seen as exon skipping events (skipping the shorter/longer exon for the longer/shorter exon). Therefore you can make the score into predicting alternative 3'end / 5'end. However, this version of the model is not doing this automatically.

@MuhammedHasan could you comment on predicting psi5 / psi3, whether anything is ready to be shared?

from mmsplice_mtsplice.

bioinfo-K1 avatar bioinfo-K1 commented on July 27, 2024

Thanks for your response. Have can I identify whether 3'end or 5'end of an exon is spliced out by the scores? Do you mean I would use the donor and acceptor scores to come up with such a score?

from mmsplice_mtsplice.

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