Comments (2)
s6juncheng
commented on July 27, 2024
Hi Tim,
thanks for using MMSplice. Have you tried this? keras-team/keras#4740 (comment)
BTW, I'm also looking into the writeVCF option.
Best,
Jun
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tstohn
commented on July 27, 2024
Hi Jun,
Thanks a lot for the quick reply. I've tried it and it also created a bunch of threads (more than specified).
However, I just saw that actually only the specified number of threads are running - so that is fine with me and anyway tensorflow dependant.
Thanks a lot also for looking into the writeVCF option,
Cheers,
Tim
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Related Issues (20)
- error running example data - Input sequence acceptor intron length cannot be longer than the input sequence HOT 3
- Problem combining MMSplice module with custom annotation in VEP HOT 4
- MemoryError HOT 17
- Replace sklearn models with numpy implementation
- Error with running MMSplice - keras decode('utf-8') HOT 4
- Used in non-model species? HOT 1
- Interpretation of Results HOT 2
- Identifying the predicted types of splicing events HOT 2
- Conda package for MMsplice HOT 1
- "stop iteration" trouble HOT 2
- Package dependencies don't overlap & trouble with google collab script HOT 3
- model predictions in google collab HOT 1
- running predictions with tensorflow is slow
- ValueError: numpy.ndarray size changed, may indicate binary incompatibility.
- How to interpret tissue specific results HOT 1
- TSplice architecture
- kipoiseq problem
- BUG: VCF requirements not clearly stated & wrong seqnames derived HOT 1
- BUG: Colab notebook is broken
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